Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceAILGFVNKQQAHDLLINKPDGTFLLRFSDSEIGGITIAWKL----DSPERNLWNLKPFTTRDFSIRSLADRLGDLSYLIYVF
4Y5W Chain:A ((429-503))-IIGFISKQYVTSLLLNEPDGTFLLRFSDSEIGGITIAHVIRGQDGSPQ--IENIQPFSAKDLSIRSLGDRIRDLAQL----


General information:
TITO was launched using:
RESULT:

Template: 4Y5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 235 -12047 -51.26 -169.67
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : -51.26
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.633

(partial model without unconserved sides chains):
PDB file : Tito_4Y5W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Y5W-query.scw
PDB file : Tito_Scwrl_4Y5W.pdb: