Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceWNDG---GFVNKQQAHDLLINKPDGTFLLRFSDSEIGGITIAW----KFDSPERNLWNLKPFTTRDFSIRSLADRLGDLSYLIYVF
4Y5U Chain:A ((424-513))WSDRLIIGFISKQYVTSLLLNEPDGTFLLRFSDSEIGGITIAHVIRGQDGSPQ--IENIQPFSAKDLSIRSLGDRIRDLAQL----


General information:
TITO was launched using:
RESULT:

Template: 4Y5U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 245 12206 49.82 167.21
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : 49.82
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.588

(partial model without unconserved sides chains):
PDB file : Tito_4Y5U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Y5U-query.scw
PDB file : Tito_Scwrl_4Y5U.pdb: