Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKTFLKDKEKIVNALQLPYSNAKLEATNNLIKLIKHNAFGFRNFENFKKERTKFVLSRSSLSSTHYS
5LN3 Chain:S ((295-326))------------IKAIQLEYSEARRTMTNALRKAPQHTAVGFKQ------------------------


General information:
TITO was launched using:
RESULT:

Template: 5LN3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain S - contact count / total energy / energy per contact / energy per residue : 38 314 8.26 9.81
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain S : 0.68

3D Compatibility (PKB) : 8.26
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.276

(partial model without unconserved sides chains):
PDB file : Tito_5LN3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LN3-query.scw
PDB file : Tito_Scwrl_5LN3.pdb: