Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLESKKTTRYVFYVYLMLLTWGILFKFETNPEFIAFFLAPRYINWIPFSEPLIVDGKIVFAEMLFNLISFIPLGVCFPLIKTNLSSLRIVGTGFLISLLFECLQYILAIGITDITDLTLNTLGVCVGLLIYQIFIRVFKSQTRKWINILGMLSLGFAYLVLLLLHLIGV
1CKO Chain:A ((172-225))-----------------------LKEFKNVPEDPAIL---RYKEWIPLEHPTIIKDHLKKANAIYHTDGLIIMSVDEPVI-----------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1CKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 57 -10517 -184.50 -194.75
target 2D structure prediction score : 0.33
Monomeric hydrophicity matching model chain A : 0.46

3D Compatibility (PKB) : -184.50
2D Compatibility (Sec. Struct. Predict.) : 0.33
1D Compatibility (Hydrophobicity) : 0.46
QMean score : 0.082

(partial model without unconserved sides chains):
PDB file : Tito_1CKO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CKO-query.scw
PDB file : Tito_Scwrl_1CKO.pdb: