Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATC--LSKDQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEEL-SSSYPLYITTTKNTSTAQDMAKNLEIHHFFDGIYGSSPEAP--HKADVIHQALQTHQLVPQ-QAIIIGDTKFDMLGARETGIQKLAVTWGFGEQADLLNYQPDYIAHKPLEVLAYFQ
3SD7 Chain:A ((32-230))------VLFDLDGTLTDPKEGITKSIQYSLNSFGIKE-DLENLDQFIGPPLHDTFKEYYKFEDKKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVE----------


General information:
TITO was launched using:
RESULT:

Template: 3SD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 928 5348 5.76 27.71
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : 5.76
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.487

(partial model without unconserved sides chains):
PDB file : Tito_3SD7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SD7-query.scw
PDB file : Tito_Scwrl_3SD7.pdb: