Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKDDQKYLLAGLYSLLVAIFYFPLIDSKGIFVSILMAVLLLYLIYFIATVIHIVIIKFIRKKSFKYLVLYPFTYDGSWRFQPINLLYFPEMVRDVIPINLVQEYCQGQPYGLLKKMLKRIRLSREIALLLATIIVYFFTHRILPLSVFTFMFSYILLFVQSYLGSNTAWIGNRRLIIDDEFEKILLSKSYVKEISSARYSEYLTCEYKNLTPIILIAIFENLLDSYLLQNQSEVD-LDIFYKVLPLL-YKEKYTMGFNYFVSLNYLLYKVGF---LGIIYDNEALRDLSKQYLNKNISELQDGSFEGGIQDAVASKQIVVINEFIACLNSRCVPSQYDRFFYKDRPYIFSRKSPIKG
4R04 Chain:A ((917-1024))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KEIFS-KYSEHITKEISTIKNSIITDVNG------QLDHTSQVNTLNAAFFIQSLIDYSSNKDVLNDLSTSVKVQLYAQLFSTGLNTIYDSIQLVNLISNAVNDTINVL---------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4R04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 234 -14165 -60.53 -146.03
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.48

3D Compatibility (PKB) : -60.53
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.48
QMean score : 0.336

(partial model without unconserved sides chains):
PDB file : Tito_4R04.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R04-query.scw
PDB file : Tito_Scwrl_4R04.pdb: