Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALAKIVFASMTGNTEEIADIVADKLRDLGLDVDVDECTTVDASDFLEA-DIAIVATYTYGDG--ELPDEMMDFYEDLADLNLNGKIYGVVGSGDTFYDEFCKAVDDFDRVFVSTGAEKGSECVKVDLSAEEEDIERLEQFAEELAAKVG
5V56 Chain:A ((382-507))-AKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDSIELQDDFIPLFDSLEETGAQGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGAEIVQDGLRID-----------------------


General information:
TITO was launched using:
RESULT:

Template: 5V56.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 637 -19991 -31.38 -162.53
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -31.38
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.572

(partial model without unconserved sides chains):
PDB file : Tito_5V56.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5V56-query.scw
PDB file : Tito_Scwrl_5V56.pdb: