Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQFLDNIKDLEVT--TVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGV---VAETKAHIYFI---NSEE----------------PSQLNDLQAFRSRYGIPTVPGFVHI-TDGQI---NVRCDSSMSAQEIKDFAGL
4FYU Chain:A ((2-133))-ADLLANI-DLKKADGTVKKGSDALANKKVVALYFSAHWCPPCRQFTPILKEFYEEVDDDQFEIVFVSLDHSEEDLNNYVKESHGDWYHVPFGSSEIEKLKNKYEVAGIPMLIVIKSDGNVITKNGRADVSGKA---------


General information:
TITO was launched using:
RESULT:

Template: 4FYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 404 5080 12.57 48.85
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : 12.57
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.449

(partial model without unconserved sides chains):
PDB file : Tito_4FYU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FYU-query.scw
PDB file : Tito_Scwrl_4FYU.pdb: