Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKKIVKDILFLSQVSQPASQEDLYLARDLQDTL--LANRDTCVGLAANMIGVQKRVIIFNLGLVPVVMFNPVLLSFEGSYE-AEEGCLS----LVGVRSTKRYETIRLAYRDSKWQEQTITLTGFPAQICQHELDHLEGRII
1LME Chain:A ((12-139))-----------LRKRAKPVTKFDENLKKTIERMIETMYHYD-GVGLAAPQVGISQRFFVMDVGNGPVAVINPEILEIDPETEVAEEG-LSFPEIFVEIERSKR---IKVKYQNTRGEYVEEELEGYAARVFQHEFDHLNGVLI


General information:
TITO was launched using:
RESULT:

Template: 1LME.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 535 -24341 -45.50 -202.84
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -45.50
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.463

(partial model without unconserved sides chains):
PDB file : Tito_1LME.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LME-query.scw
PDB file : Tito_Scwrl_1LME.pdb: