Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKQLPKISTTSKALAKSLLLAQGVLDQAKKYSTLPFTQTHIILPRIDEKYYSWTHYGIFFPLLPEPHRYLNIMILIGTPGALAFDHDDIITGNPRKTATFFSSTAALEQALLKAYIIPEDTKINKDGTLIELGQEISIQGK-FPHIHINGHYDGFDFDFDIDITSHVSWFIKT---P--------IYDHFSLLAKFKGFLNYQAKHIETQGLCTYEYARAVGPHSITNKLIPDAYKLPLDFFTYQIINLNEATQLLLTKAD-IAGQT-AAYTLHIRHLDQPAEIY--TDVSFDIISHQVDDFVSPS-GQKMRLPKYFSWIARNDAKQIILNIQAEIDCPFR-YG---HGRGYASSYIFTGHYFGNEVQGRGYIEYVDIENPQAFEDE
2ICH Chain:B ((102-329))-----------------------------------------------------------------------------------------------------------------------------TGNTDVKLDDW-IFVRETDGRYRTRIEAEDFTLTFILTPSQPLMLQGENGFSRKGPGAPQASYYYSEPHLQVSGIINRQGEDIPVTGTAWLDREWSSEYL-----------DPNAAGWDWISANLDDGSALMAFQIRGKDDSKIWAYAALR-DASGHTRLFTPDQVSFHPIRTW----RSARTQ--AVYPV--ATRVLTGE--TEWQITPLMDDQELDSRASAGAVYWEGAVTFT--RDGQ-PAGRGYMELTGY---------


General information:
TITO was launched using:
RESULT:

Template: 2ICH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 897 -16988 -18.94 -82.07
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.58

3D Compatibility (PKB) : -18.94
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.275

(partial model without unconserved sides chains):
PDB file : Tito_2ICH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ICH-query.scw
PDB file : Tito_Scwrl_2ICH.pdb: