Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLLLKVRQNVPQVQSIKTSLKKRAGQKIPHMLSNASDLFFRGSEIALSGKTPFDVIYKHEIISLRHYRIETEASAHKHRVPLVIVPPLAVNMLIYDLFPTRSLIRYFLDQGFEVYLIDWG---VPT-------RNQAKYNFGTYVKVFMPEMLKQVRIHSGQQQLSLHGWSLGGALSLCYTALFKDKDIKNLMILASPIDTHKAGYMGKLYGSLTKPAQWVRKHTPFRIRQHVPSEVFHIHGWQNTLGFKLTAPIGNLKTYWQLLKNLDNREFIVDHATSSSFIDNMLAYPGGVMRDIILRFWIDNELSTGVIKFGELTAYLKDIDCSVLAVGGDTDIIVTADAVKPLMDLISSQDKTFKTVPSGHMGVVSGSQAPTSVWPEMSNWLAMRSD
2RAU Chain:A ((83-178))-----------------------------------------------------------------------------------------------------KSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWISD-IKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2RAU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 186 -14729 -79.19 -175.34
target 2D structure prediction score : 0.79
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -79.19
2D Compatibility (Sec. Struct. Predict.) : 0.79
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_2RAU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2RAU-query.scw
PDB file : Tito_Scwrl_2RAU.pdb: