Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQQQVIIVGGGMVGLSLSLMLAKANIAVKLLEAVKYPNYDDQNVAPYHSSFDARNTALSRRSVQIYQKLGLWDALQQHATPILQVHITEQGSFGKARLIAEQEKVESFGQVIENAWLGRVLLTQVRQQPLIELIDGVQVTALTQDAEQVHIEAQRGDEVLKLESKLLIAADGRDSFCRQAIGVG----------------VDVHDYDQVAIVTTVQTSKPHEHVGFERFSALGPLALLPLPGEYRRSVVWPVKKGTEGEWLGEENDQHFLDALQKTYGDRAGK-FEKTGKRF--SYPLSQVLAHKQAVGRIILMGNAAHTIHPVAGQGFNLCLRDADVLLRYLVNQLSASDDIGNPDNLLAYEEARLSDQQRVIKFCDTVVRGFSNQNPLLKLIRNTGLIAFDVIPGVKPLVANYAMGLKA
5KOW Chain:A ((7-326))----VIIAGGGPTGLMLAGELRLHGVRTVVLEKEPTPN--------QHS----RSRGLHARSIEVMDQRGLLERFLAHGE---QFRVGGFFAGLAAEWPADLDTAHSYVLAIPQVVTER-LLTEHATELGAEIRRGCEVAGLDQDADGVTAELADG---TRLRARYLVGCDGGRSTVRRLLGVDFPGEPTRVETLLADVRIDVPVETLTAVVAEVRKTQ-------LRFGA------VPAGDGFFRLIV-------PAQGLSADRAAPTLDELKRCLHATAGTDFGVHSPRWLSRFGDATRLAERYRTGRVLLAGDAAHIHPPTGGQGLNLGIQDAFNLGWKLAAAIGG---WAPPDLLDSYHDER-------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5KOW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1595 -118075 -74.03 -392.27
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -74.03
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.368

(partial model without unconserved sides chains):
PDB file : Tito_5KOW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5KOW-query.scw
PDB file : Tito_Scwrl_5KOW.pdb: