Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSTLNTRLIWIDLEMTGLDTDNDQIIEIATIITDDHLNVLAEGPVLAIHQPDRILNAMDEWNTRQHGQSGLIERVRRSKLTARDAELQTLEFLKKWVNPKVSPMCGNSICQDRRFLHRLMPELEQYFHYRNLDVSTVKELSKRWRPEIMSGLKKNASHLAMDDIRDSISELKYYREYFFIMNTDGKD
1J9A Chain:A ((10-180))--------LIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQKTHSENGLIERIKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLADYFHYRHLDVSTLKELAARWKPEILEGFKKENTHLALDDIRESIKELAYYREHF---------


General information:
TITO was launched using:
RESULT:

Template: 1J9A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 805 -85747 -106.52 -501.44
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.90

3D Compatibility (PKB) : -106.52
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.90
QMean score : 0.522

(partial model without unconserved sides chains):
PDB file : Tito_1J9A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1J9A-query.scw
PDB file : Tito_Scwrl_1J9A.pdb: