Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEHPQGQKHCSFCGKTQSEVGKLIAGEDAYICNECVDVCLDLVQTSQQVEAGDWASKALPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKRLKVGQSGHVSKDVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKG-GIGFTADVKNKDETKKLAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAVINGEAEPVYKSERQPKEAVTHESVAKADLKVIDSKSA
4I63 Chain:A ((2-349))----------------------------------------------------------ALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLR---NGDTS----LGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLT--GYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNP---RDVSGEGVQQALLKLIEGT----------------FLQVDTSKILFICGGAFAGLDKVISHRVETGS---------------SEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPL-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 4I63.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1491 -139283 -93.42 -453.69
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : -93.42
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.608

(partial model without unconserved sides chains):
PDB file : Tito_4I63.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4I63-query.scw
PDB file : Tito_Scwrl_4I63.pdb: