Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYSLMSVTEKETSNSLYRQWQILSRLPTGKWIGTRELQEMLEREGIEISLRTIQRDLNQIAQRFPIESNKAVPQGWRWQSDAPIQSLPHMTSSQAVTFMMVEEHLKRLLPPSLLDEMGPWFDLAKRSLSTQNNVRQWINRVRIVPASQPLIPPVVDRAAQQAIYEGLLQDKQIECVYRARVNQGEDKTYILNPLALVQKGAVIYLICTRHDKTEVQTFALHRFKSAKVLESRALHPVNFDIDHYIDSGALGFRVDYNQPTESIQLTLTMTEQTAKTFYESQLSKDQTITPIEENIVEVTATVPFTSQLVWWLRSFGKKLLHIEPVQVHNAVREIEPDSK
3LAJ Chain:A ((15-71))-----------AANRAGRQARIVAILSSAQVRSQNELAALLAAEGIEVTQATLSRDLEELG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3LAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 134 -18722 -139.72 -374.44
target 2D structure prediction score : 0.84
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -139.72
2D Compatibility (Sec. Struct. Predict.) : 0.84
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.610

(partial model without unconserved sides chains):
PDB file : Tito_3LAJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LAJ-query.scw
PDB file : Tito_Scwrl_3LAJ.pdb: