Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNHDLIHSTAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNNLIREHCSLHRGTVQDNALTKIGSHNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFCKIDSYSMIGGASLILKDVPAYVMASGNPAHAFGINIEGMRRKGWSKNTIQGLREAYKLIFKSGLTSVQAIDQIKSEI---LPSVPEAQLLIDSLEQSERGIVR
2AQ9 Chain:A ((7-262))-----FVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNAYKLIYRSGKT----LDEVKPEIAELAETYPEVKAFTDFFARSTRGLIR


General information:
TITO was launched using:
RESULT:

Template: 2AQ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1568 -207948 -132.62 -821.93
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.88

3D Compatibility (PKB) : -132.62
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.613

(partial model without unconserved sides chains):
PDB file : Tito_2AQ9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2AQ9-query.scw
PDB file : Tito_Scwrl_2AQ9.pdb: