Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATPFWYNTALHLLKPFYRWRIKRRAESLELYQQECLERFGPFEAPKNVK-AIWFHAVSVGETNAAQPLIEYYLKLGQPVLVTNTTKTGQARAKSLFLKEPYLDLFQAVYLPVDQKPLLKKFFELYQPKLLALVETELWPNLIDQAKLQHVPCLLLNARLSEKSAKGYGKVSGLTAGMLKQLDWVLAQDSATRQRYVELGLDEHKSQVVGNIKFDIHAPEAFIKQAAQLRQQWYLENRQVVTIASTHAPEEQQILEAFAPYLNSDRELVCIVVPRHPERFDEVFEICQNLNLITHRRSMGQSIHASTQVYLADSMGELWLWYALSQVCFVGGSLNEPGGGHNILEPMVLNVPTVVGPRYFNFQTIVDEFIDENAVLIAQDAQQVVDIWLACLAEPEATEQLVAQAHKVLQRNQGSLQKHIGVINRYLAEKS
2XCU Chain:A ((23-309))--------------------------------QFEVLKRFFPKESLKNCKGALWVHTASIGEFNTFLPILKE-LKREHRILLTYFSPRAREYLKT---KSDFYDCLHP--LPLDNPFSVKRFEELSKPKALIVVEREFWPSLIIFTK---VPKILVNA---------YAKGSLIEKILSKKFDLIIMRTQEDVEKFKTFGAKRVFS--CGNLKFICQKG-----KGIKLKGEF-------IVAGSIHTGEVEIILKAFKEIKKTYSSLKLILVPRHIEN-AKIFE--KKARDFGFKTSFFENLEGD--VILVDRFGILKELYPVGKIAIVGGTFVNI-GGHNLLEPTCWGIPVIYGP--------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2XCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1455 -18438 -12.67 -64.47
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -12.67
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.356

(partial model without unconserved sides chains):
PDB file : Tito_2XCU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2XCU-query.scw
PDB file : Tito_Scwrl_2XCU.pdb: