Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKAQKLTLAVLISAAIISSAQASEQSEAKGFVEDANGSILFRTGYLTRDKKQGAKDTSSVAQSAIVSIESGFTPGIVGFGVGVVGDGSFKI-GENKNTGNQMIPKHNDGSAYDHWARGGGSVKARFSNTTVRYGTQVLDLPVLASNTGRMVPEYFTGTLLTSHEIKNLEVVAGKFTKDQMSDQINTDADA----SGRGLDRAIVWGAKYKFNDNLNASYYGLDSKNALERHYANVNFKQPLANDSSLTYDFSGYHTKFDANAHTYSATGTVAPNYAADGIADEEKTNNIWAISGTYATGPHSVMLAYQQNTGNVGYDY---GQNADGFQSIYLPNSYM-SDFIGNHEKSAQIQYNVDFGKLGVLPGLNWTTAFVYGWDIKVRNVTD------------DAQEREFFNQVKYTVQSGFAKDASLRIRNSYYRASDAYQGAYIGDTNEWRIFLDIPVKLF
2ODJ Chain:A ((5-420))-----------------------SDQAEAKGFIEDSSLDLLLRNYYFNRDGK-----RVDWTQGFLTTYESGFTQGTVGFGVDAFGYLGLKLDGT-------------------DYSRAGGAVKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGFQLQSSEFEGLDLEAGHFTE-----------ELYATYAGETAKSADFIGGRYAITDNLSASLYGAELEDIYRQYYLNSNYTIPLASDQSLGFDFNIYRTNDEGKAKA------------------GDISNTTWSLAAAYTLDAHTFTLAYQKVHGDQPFDYIGFG-------SIFLANSVQYSDFNGPGEKSWQARYDLNLASYGV-PGLTFMVRYINGKDIDGTKMSDNNVGYKNYGYGEDGKHHETNLEAKYVVQSGPAKDLSFRIRQAWHRA-NADQGE--GDQNEFRLIVDYPLSIL


General information:
TITO was launched using:
RESULT:

Template: 2ODJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1943 44409 22.86 126.52
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : 22.86
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.321

(partial model without unconserved sides chains):
PDB file : Tito_2ODJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ODJ-query.scw
PDB file : Tito_Scwrl_2ODJ.pdb: