Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSADTQHFTGTDQYIATDSLKLAVKAARALQKPLLVKGEPGTGKTLLAEQVAESLGLKLITWHIKSTTKAQQGLYEYDAVSRLRDSQLGDDRVYDIKNYIKPGKLWEAFTSEERCVLLIDEID---KADIEFP------NDLLHELDKMSFYVYETGETITATQRPIVIITSNNEKELPDAFLRRCFFH---YIEFPDEATMREIISVHFPNISVTLVNEALQVFFKLREIPNLKKPPSTSELIDWLSLLMADDMPEDVLRNRDTSKAIPPLYGALIKNEQDVQLLERLAFMSRR
4WW0 Chain:A ((52-240))-------------------------------KGVLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGV----GAARVRD-------------------LFETAKKHAPCMIFIDEIDAVGR------EREQTLNQLLVEMDG-----FDTSDGI------IVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARN-----------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4WW0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 582 -27839 -47.83 -215.80
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -47.83
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.539

(partial model without unconserved sides chains):
PDB file : Tito_4WW0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WW0-query.scw
PDB file : Tito_Scwrl_4WW0.pdb: