Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIQRSGRFERIKKPLKSDMNVVPYIDVMLVLLVIFMVTAPMITSGIKVDLPQANNHPIESKDMPAMVTIGKDGNIYLQYEDYKDNEPLSLEKLESVLSEAQKKAEQENKQLTVLVNGDKTRPYGEVVSLMASLQEAGLTQVGLLTEPLK
2PFU Chain:A ((45-135))----------------------------------------------VKVNLPASTSTPQPRPEKPVYLSVKADNSMFIG------NDPVTDETMITALNALT----EGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGE---


General information:
TITO was launched using:
RESULT:

Template: 2PFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 242 -30516 -126.10 -335.34
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -126.10
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.571

(partial model without unconserved sides chains):
PDB file : Tito_2PFU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PFU-query.scw
PDB file : Tito_Scwrl_2PFU.pdb: