Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVQVKLLDPRLGKEWPLPSYATAGSAGLDLRACLDEAIEIEPGQTVLVKTGMAIYIHDVNFAGLILPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSVWNRGQTTFRLEPGERLAQYVLVPVVQAEFEQVEEFEETLRGAGGFGHTGKQ
1DUD Chain:A ((4-136))-KIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLNDAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISVWNRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDF----------------


General information:
TITO was launched using:
RESULT:

Template: 1DUD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 571 -94321 -165.18 -709.18
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.91

3D Compatibility (PKB) : -165.18
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_1DUD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DUD-query.scw
PDB file : Tito_Scwrl_1DUD.pdb: