Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPRKGPVAKRDVLPDPIYNSKLVTRLINRVMVDGKRGIAANIIYNAFDLIKESTGNDPLEVFEQAMKNVQPVLEVKARRVGGSNYQVPVEVRPERRVTLGLRWVVNYARLRGEHTMEERLAKEIMDAANNTGASVKKREDTHKMADANRAFAHYRW
3GTY Chain:S ((9-155))---------RQIPPDPVFGDVLVAKLINRVMWDGKKTIAQKIVYGAFDIIREKTKKDPLEVFRQAVENVKPVLEVRPRRVGGATYQVPIEVQEPRRTSLALRWIVEAARAKKGRPMKEKLAEEIIAAYNNTGTAIKKKEDTHRMAEANRAFAHYRW


General information:
TITO was launched using:
RESULT:

Template: 3GTY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain S - contact count / total energy / energy per contact / energy per residue : 590 -46874 -79.45 -318.87
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain S : 0.91

3D Compatibility (PKB) : -79.45
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.591

(partial model without unconserved sides chains):
PDB file : Tito_3GTY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GTY-query.scw
PDB file : Tito_Scwrl_3GTY.pdb: