Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANEETVGLRIIEEAFKLPMVKVDRRAFLIQTFQGKVSDIEGLIEKGPQAFLSKEMLDREAQKCIQSITLKSSAVSLATGLPGGIAMAATIPADLLQFFGYSLRLAQEISYIYGFKDLMGENGELSEEAKNTLILYLGIMLGVTSAGSAVRAMSGKLSTQALKKIPQKALTQTLYYPVIKRVLGIFGTKLTKNTFAKGISKAVPVVGGVVSGGINYLSMKPMATKLQTELGKNVAYTEESLQQDLDILEGEFEEVSSDIASSDTVLSQLERLSHLLETNMITEEEFQQLKQELLKK
2ZYD Chain:A ((303-430))--------------------------------------------------------------------SLKDQRVAASKVLSGPQAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWD------LNYGEIAKIFRAGCIIRAQFLQKITDACAENPQ--IANLLLAPYFKQIADDYQQAL-RDVVAYAVQNGIPV-------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2ZYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 343 -45198 -131.77 -353.11
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -131.77
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.304

(partial model without unconserved sides chains):
PDB file : Tito_2ZYD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ZYD-query.scw
PDB file : Tito_Scwrl_2ZYD.pdb: