Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKENFKRSVSRMNAFRSFQVIKEPVFHTAISDLPFTELAENEVLVKIAYSDVNYKDALAMSESGQVIRTYPMTPGIDLSGTVVQSNNPRFSKEDLVLATGFGLGVTHPGGYSQYQKVPGDWLVPLPKNMTLRQAMILGTAGFTAMLCVNALIRQGMT-SDKKVVVTGASGGVGSTAIALLHKLGFQSIIAFSRKEESVTWLKSLGALQVVRPDEFLPETTKALGKQQIDYVIDTVGGEQLSSLLPLISYNGAVALCGNAGGIKLNATVLPFILRNIQLIGIDSVNVPIDQRLSLWQQMADLQIADELVVQ---EITLDQLPETASKLLAGTHQGRTLVNVGDHK
3NX4 Chain:A ((15-323))----------------------------ASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASEDPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQ-VAAVSGRESTHGYLKSLGANRILSRDEF--AESRPLEKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVK-DLPESFYAQAATEITLADAPKFADAIINNQVQGRTLVKI----


General information:
TITO was launched using:
RESULT:

Template: 3NX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1864 -139797 -75.00 -458.35
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -75.00
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.565

(partial model without unconserved sides chains):
PDB file : Tito_3NX4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NX4-query.scw
PDB file : Tito_Scwrl_3NX4.pdb: