Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLEDKVVLVTGSSGGLGAQICYEAAKQGAIVISCARRMAFVEGVRDECRRLSGKEAYAFKVDVSNPESVDELYEKVMEEVGRVDILVNNAGFGIFEDFLTFDLGKA--CDMFEVNILGMMVLTQKFAIDMAERRQGHIINIASMAGKMATAKSTVYSATKFAVLGFSNALRLELKPLGVAVTTVNPGPIETDFFDKADPSGSYLEKVGQIVLEPAKLAKMIVRNMRHPKREINQPFILEVASKFYTLFPTIGDYLASGIFNKK
4WK6 Chain:A ((8-195))MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL----GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAG--ITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVASVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM----------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4WK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 919 -68545 -74.59 -368.52
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -74.59
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.566

(partial model without unconserved sides chains):
PDB file : Tito_4WK6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WK6-query.scw
PDB file : Tito_Scwrl_4WK6.pdb: