Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAWFTLILFGLMTVATLSQKLILLTLFIAIVALIKGPVMILWGMLYSFLVGLFPPIGILLSAIFFLLNIGTFTKNWRMTLVGIYFYFYPFGVMALSEVMHWDNHWFIAGSLLLGLILLHVMLTKLYQHYGIGRTIFWYVFSIPFALLTALLPSRLKTKIKGYHKIK
2WWD Chain:A ((161-213))---------------------------------------------------LYDPA---YSAYFYLKSDGTYANQEWQKVGGKWYYFKKWGYMARNE---WQGNYYLTGS--------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2WWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 154 -33314 -216.32 -628.57
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.43

3D Compatibility (PKB) : -216.32
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.43
QMean score : 0.191

(partial model without unconserved sides chains):
PDB file : Tito_2WWD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WWD-query.scw
PDB file : Tito_Scwrl_2WWD.pdb: