Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMAKIQELSERLANQIAAGEVVERPASVVKELVENAIDAGSTQIDILVEEAGLRTIQVIDNGEGILADDVENAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSEMTLETANQEEKQGTYLSLKGGEVIEHRPAPLRQGTKITVSNLFFNTPARLKYVKTLHTELANIGDIVNRLALSHPSIAFRLVHDG---NKMLATAGNGDLKQTIAGIYGLSTAKKMLKIEGKDLDFELFGYVSLPEVTRASRNYLSTI-INGRFIKNFSLNKAIVAGYGSKLMVGRFPIAVLEIKMDPLLVDVNVHPTKQEVRLSKEKELTELISNAIQKALSQENLIPSAADNLRFKKKVPDQPKTEQIEIDLSYAFEEEKPKKPSSLNFDRETGTFFVEELKNTFVDRIVDKSVENVENYSGFSEENTTYPEKTAKTVDKFGENVDNFVEKTVEKSEKKEFPIVDNMEKTNEEQADKSVEEDEKIYEEELTLHPEFDFTQGNDKTLEQAIKKLETEKPVQRFPQLEYFGQMHGTYLFAQSSDGLYIIDQHAAQERIKYEYFREKIGEVSDDLQELLVPFVLDYPNSDALKLKEQKHLLEDAGIYLEEFGQNSFIVRAHPTWYPNGEEESIIREMIDMLLTTGSVSVKKFREATAIMMSCKRSIKANHYLNEAQARVLLKDLARCENPFNCPHGRPVLIHFTNSDMERMFKRIQDPH
5AKD Chain:C ((40-351))--------------------VERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGSGIKKDELALALA------IASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEAWQAYA-----VTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAILGTAFLEQALAIEWQHGDLTLRGWVADPNHTTPALAEIQYFYVNGRMMRDRLINHAIRQAYEDKLGADQQPAFVLYLEIDPHQV---------------SRLVHDFIYQGVLSVLQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5AKD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1220 -93758 -76.85 -333.66
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain C : 0.66

3D Compatibility (PKB) : -76.85
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.451

(partial model without unconserved sides chains):
PDB file : Tito_5AKD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AKD-query.scw
PDB file : Tito_Scwrl_5AKD.pdb: