Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYDLHDIVEMKKPHACQTNRWEVIRMGADIKIRCMNCGHIVMMTRR------DFEKKLKKVIEKNAEKE
5LN3 Chain:J ((356-397))--------------------------GAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEK-


General information:
TITO was launched using:
RESULT:

Template: 5LN3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 74 5748 77.67 159.65
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain J : 0.69

3D Compatibility (PKB) : 77.67
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.184

(partial model without unconserved sides chains):
PDB file : Tito_5LN3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LN3-query.scw
PDB file : Tito_Scwrl_5LN3.pdb: