Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTSLIEKQIVNKEIRVTDPLFEVIHQIQAENEEPLAALNTGYHEPADIRKRLENIISDKVDDTVTVLLPFYTDFGKHISIGKNVFINRQVMFVDLGGICLEDSVLIGPRVNLITVNHLTDPKER-RGLS-VKPIHIKKNAWIGAGATILPGVTIGENAIVAANATVTKDVPDNTIVAGIPAKIVKPVERII
5V0Z Chain:A ((20-188))----FDQYLINERARAKDICFELNHT------RPSAT---------NKRKELIDQLFQTTTDNVSISIPFDTDYGWNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVVTKDIPPHSLAVGNPCKVVRKID---


General information:
TITO was launched using:
RESULT:

Template: 5V0Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 843 -67781 -80.40 -405.87
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -80.40
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.604

(partial model without unconserved sides chains):
PDB file : Tito_5V0Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5V0Z-query.scw
PDB file : Tito_Scwrl_5V0Z.pdb: