Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKEMSQTIKVQKMIDDLTHGIDSQADKIIKELQGQKVKDAKMLLKTINFEMNPTKRKLADVLEEKLASAINEQELLFETDTFNS
4MDX Chain:A ((79-109))---EQIRTIDKQRLTDKITHLDDEMMDKVDEALQ---------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4MDX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 14 -1027 -73.32 -33.11
target 2D structure prediction score : 0.32
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -73.32
2D Compatibility (Sec. Struct. Predict.) : 0.32
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.388

(partial model without unconserved sides chains):
PDB file : Tito_4MDX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MDX-query.scw
PDB file : Tito_Scwrl_4MDX.pdb: