Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQEIKKLPVIFLGLFFITVGLNWFLLPHDIASAGVGAIGHLVETAFSIQRSVTVWSINLMMLLLAAVLLGKSVFFKTVAGSLLFPVVLEIVPKVEMISSHF-FSLISGSLL---FSLGVYTLYTVGASNGGITIPPIIFHKFFRLPMPQGLLLTNSLIVFLNYYVFGLLETLFVLLSITVSSLFMKILIRLSPVSRKFE
4MQT Chain:A ((44-126))-------------------------------------------------------------------VLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTV--------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4MQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 109 -19023 -174.52 -345.86
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.46

3D Compatibility (PKB) : -174.52
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.46
QMean score : 0.206

(partial model without unconserved sides chains):
PDB file : Tito_4MQT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MQT-query.scw
PDB file : Tito_Scwrl_4MQT.pdb: