Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKLIITAAVNGGITPRSKNPAVPYTPEEIANAVYEVWNAGASVAHIHARNLDGSPSYQQEVWGEIVDKVRARC-DIILNLSTSGLNLPLDAPKDQAWNHLVYRPEIASYNCGSVNHGSKPFINPPALAMELADAINQYGVKPEIEIYHSGVINEAETLHLKGYLKSPMLFAFAMGIHGGVTATCKNLIHLID----SLPAGSLWSALGIGKAQLPINVHTILLGGHVRTGLEDNIYYKAGELATSNAQLVERLVRLSHELDRPVASTQEARKILGLVS
3NO5 Chain:E ((3-275))NKPCIISVAITGSLPRKKDNPAVPITVSEQVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGIRKHAPGMITQVSTGGRSGAG----NERGAMLSLRPDMASLATGSVNFPTRVYDNPPELVDWLAAEMKTYGIKPEVEAFDLSMIFQAAAMQAAGAIVGPLHIQFVMGIKNAMPVDREVLEFYVQTLKRLSP-DATWTGAGIGRHQLTMARWSLELGGHCRTGLEDNVRLDKNTLAPSNAALVRQVAELCEEYGRPVATAAQAREIMSLG-


General information:
TITO was launched using:
RESULT:

Template: 3NO5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1547 -33551 -21.69 -125.19
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain E : 0.79

3D Compatibility (PKB) : -21.69
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.536

(partial model without unconserved sides chains):
PDB file : Tito_3NO5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NO5-query.scw
PDB file : Tito_Scwrl_3NO5.pdb: