Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHIKEKTLDDLLNSTYTFILENGDHITA-SKGENFEVRNAVLTLENPRSRLSISE-TRSKLISCIGEFFWYLNGSDSLEFIEYYISDYRK-YIEYQIDENKPALGAYGPRIFGA-------QNQFNKIIEVLKDKPTSRRAVISIYSKDDLLREDSRDIPCTCLLQFFIRNERLHLTATMRSNDAAIGLVHDIFSFTLIQELLLAKLIRYIPNLQLGEYTHIVGSLHIYKKI
1TJS Chain:A ((14-213))--------------------DEGTQKNDRTGTGTLSIFGHQMRFNL-QDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWAD----ENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELD--KMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQ-----QCDLEVGDFVWTGGDTHLYSNH


General information:
TITO was launched using:
RESULT:

Template: 1TJS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 754 -21485 -28.49 -113.08
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -28.49
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.359

(partial model without unconserved sides chains):
PDB file : Tito_1TJS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TJS-query.scw
PDB file : Tito_Scwrl_1TJS.pdb: