Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQHQSLFNKSQWTQLVKHFSAVAVLGLTIAAPAWAIDPTAKELRIGFQKSSINFAIAKQQKLFEQEFPNAKITWNEFPAGPQILEALAVGSLDVGVTGDTPPVYAQAAGKPLYYIAYEAAKPLASAILVPKNSQLKQLKDIKGKRIALQKGSSSHYLLVQ-AVRKAGLK-WSDITPIWLTPADARAAFQKGAVDAWAIWDPYYASAQLEDQARVLVSGKGLSPNY--TFYLAAPNFVKQYPKAVPGLIKQINQADKWV--QSYQVETASAIGQSTGLKPATSDLFIKRRPRPSSAAPLNSKV-----------------IAEQQQIADIFTQQGIIPKPISIKQAVWGAK--------------------------------------------------
2G29 Chain:A ((28-412))-------NAPEVTTA-----KLGFIALTDAAPLIIAKEKGFYAKYGMPD--VEVLKQASWGTTRDNLVLG-SASGGIDGAHILTPMPYLITMGTVTDGKPTPMYILARLNVNGQGIQLGNNYKDLKVGTDAAPLKEAFAKVTDPKVAMTFPGGTHDMWIRYWLAAGGMEPGKDFSTIVVPPAQMVANVKVNAMESFCVGEPWPLQTVNQGVGYQALTTGQLWKDHPEKAFGMRADWVDQNPKAAKALLMAVMEAQQWCDQAENKEEMCQILSKREWFKVPFEDIIDRSKGIYNFGNGQETFEDQEIMQKYWVDNASYPYKSHDQWFLTENIRWGYLPASTDTKAIVDKVNREDLWREAAQALEVPADQIPSSPSRGIETFFDGITFDPENPQAYLDSLKI


General information:
TITO was launched using:
RESULT:

Template: 2G29.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1925 -46142 -23.97 -147.89
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -23.97
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.421

(partial model without unconserved sides chains):
PDB file : Tito_2G29.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2G29-query.scw
PDB file : Tito_Scwrl_2G29.pdb: