Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASRPVLATGITTELKIRGKSMNILTDKAHYESHLEAYIVQKLQAQGWVVGQSKNYHTEYALYPEDLITWIQATQPEKWEKLQALNGSNTEKRIIDRLDDELNKKGTIHIFRNGFSMAGAGTIDLSESAPEDGRNQAVIDRYNANILRVVPQLKYHPSKDAGILDLVFFINGLPMATVEIKTEFNQSLEDAIEQYKNDRKPIDPKTRRKEPLLTPKRGAIVHFALSESEIAMTTALDGESTYFLPFNKGNQGHAGNPPADVAKGEDYPVAYFWDYVCQRDNWLKIFHNFVYVEKKNKVDLYGNWTVQERLIFPRYHQFDAVNKIIADVQEKGVGLNYLCEHSAGSGKTSTISWVCHSLVRLRHNDGTPFYNSVIVVTDRTVLDNQLQEAIQQLDHQKGL-IAAINRDDKEHAGKSKSKQLEDALLSNKQIIIVTIQTFPHVMEAILTNTSLSDRNYGIVIDEAHTSQTGSTASKLQATLALQSGEAMANLTVEELLEQIQKARVQSKNISHFAFTATPKHSTKMLFGRTKNGEPASDDNLPEPFHLYPQ-RQAIEEGFILDVLQGYVPYKTAFKLGGEAVDDDKRVNSKAAKKALARWMALHATNVTQKVQFIIQHFHHNVANLLNGQAKAMIVTSSRPAAARYKIALEKYIDDNPEYSAYRVLVAFSGKLTGKQISHEADGDSENGVLFQVGEDAEFTEANMNADAPNSDLRIAFDRPEYRLMVVANKFQTGFDQPKLCAMYIDKVIANEVEVVQTLSRLNRTTTGKDQTFVIDFVNDPEWILKCFKKYDNGAKMVDVQDPNVVYTIKDNIEELDLITEDDLEEFKAARFKTIRDISNHDFKETTHPDLFKATDRVARLFNQKLKMLKQAIELQETAFDQAKADGNDEGAEKAEFERKQLDVELQTLMRFKGNLDKFSRIYSYVAQLIDFGDPELENFSAFTKLLSKRLNGMSAKEIDISGLVLTGFGIFKKKLKTDDTDHPEADEPQPLAPIQGTANGDLQPTKMTYLKEVIELIAQTFGDISTREEQVVYINHLVTILRNNDVVMAQIENNPESTALQGNLPSATKGAIIQALTSHQDLSALLLKTDAQAMQNVIKVLYKLLKDGETIDVHRLT
2DB3 Chain:A ((77-405))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIPTPIQKCSIPVISS-------GRDLMACAQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGT-------SFRHQNECITRGCHVVIATPGRLLDFVDRT---FITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHV---------------------TMRPEHQTLMFSATFPEEIQRMAGEFL--------------KNYVFVAIGIVGGACSDV-------KQTIY--EV---------------------NK-----YAKRSKLIEILS-------EQADGTIVFVETKRGADFLASFLSEK-----EF----PTTSIHGDRLQS---------------------------------QREQALRDFKNGSMKVLIATSVASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGN---NGRATSFFD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2DB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1874 -45845 -24.46 -140.20
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -24.46
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.360

(partial model without unconserved sides chains):
PDB file : Tito_2DB3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DB3-query.scw
PDB file : Tito_Scwrl_2DB3.pdb: