Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------MFLAEFNQAPPDQLKTLLNNCVHIPVWAEKIISERPYSSTSVLLGYAEQLSHTWSWQEIQAALATHPKIGERQAKKQLNAKEQNF-----SAQEQAGISLDEQTQQALLQGNIEYEQKFGFIFLIKAAGLSSDEILKKLHQRLQ---NNLAIEKVIVHEQLAAIALLRLSQEVQA----
5M1H Chain:A ((1-180))PIGTVIPIQHIRSVTGEPPRNPRE-------IPIWLGRNAPAIDGVFPVTTPDLRCRIINAILGGNIGLSLTPGDCLTWDSAVATLFIRTHGTFPMHQLGNVIKGIVDQEGVATAYTLGMMLSGQNYQLVSGIIRGYLPGQAVVTALQQRLDQEIDDQTRAETFIQHLNAVYEILGLNARGQSIRLE


General information:
TITO was launched using:
RESULT:

Template: 5M1H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 784 -3441 -4.39 -21.50
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -4.39
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.260

(partial model without unconserved sides chains):
PDB file : Tito_5M1H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5M1H-query.scw
PDB file : Tito_Scwrl_5M1H.pdb: