Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNDVRNDDPNFNVMGNFDHGLTLALSKGRILKETLPLLATAGINLLEDPEKSRKLIFPTTHKQVRILILRASDVPTYVENGAADLGVAGKDVLMEHGAQHVYELLDLQIAKCKLMTAG------KVGMERPKGRLKIATKYVNLTRQYYASLGEQVDVIKLYGSMELAPLVGLGDYIVDVVDTGNTLRANGLEPLEEICKVSSRLIVNKASFKRKQVLLNPIISQLEQAVQSR 2VD3 Chain:B ((11-208)) -------------------------SKGRISEPAIRLLENAGVGLKD--TV-RKLFSKTQHPQIEVMFSRAADIPEFVADGAADLGITGYDLIVERGSD-VEILEDLKYGRASLVLAAPEDSTIRGPEDIPRGAV-IATEFPGITENYLREHGIDAEVVELTGSTEIAPFIGVADLITDLSSTGTTLRMNHLRVIDTILESSVKLIANRESYATK----SGIIEELRTGIR--

General information: TITO was launched using: RESULT: Template: 2VD3.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 930 -15807 -17.00 -82.76 target 2D structure prediction score : 0.62 Monomeric hydrophicity matching model chain B : 0.79 3D Compatibility (PKB) : -17.00 2D Compatibility (Sec. Struct. Predict.) : 0.62 1D Compatibility (Hydrophobicity) : 0.79 QMean score : 0.468

(partial model without unconserved sides chains): PDB file : Tito_2VD3.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2VD3-query.scw PDB file : Tito_Scwrl_2VD3.pdb: