Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATAVNCNICFIGGGNMAQALIGGLISRG-LPPTRITV---SDPVEQIRQLLQEKEVHVTQDNTAAIQNADVVVLAVKPQVLANVLRPLKGLLS-DKLVISIIAGAEIKTISNLIDSERIVRVMPNTPALVQTGAHGIYATDVVGASDRELTSQILAATGLTIWVNSEAQIDAVTAVSGSGPAYFFYLMESMIRAGKNLGLDEKVATALTLQTALGAAQMAITSSNTPSELRKNVTSPNGTTQAALEVFDRAQISQNIQSALAVAQKRSQELAQELSDSAK
5BSG Chain:J ((11-277))---ADSYTLGFIGAGKMAESIAKGAVRSGVLSPSRIKTAIHSNPAR--RTAFESIGITVLSSNDDVVRDSNVVVFSVKPQLLKDVVLKLKPLLTKDKLLVSVAAGIKMKDLQEWAGHERFIRVMPNTAATVGEAASVMSLGGAATEEDANLISQLFGSIG-KIWKADDKYFDAITGLSGSGPAYIYLAIEALADGGVAAGLPRDLALSLASQTVLGAASMATQSGKHPGQLKDDVTSPGGTTIAGVHELEKAGFRGILMNAVVAAAKRSQELS--------


General information:
TITO was launched using:
RESULT:

Template: 5BSG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 1103 -11737 -10.64 -44.80
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain J : 0.81

3D Compatibility (PKB) : -10.64
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.546

(partial model without unconserved sides chains):
PDB file : Tito_5BSG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BSG-query.scw
PDB file : Tito_Scwrl_5BSG.pdb: