Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNQIPLKPQNERFTDDQWQAIFDQGDNLLVSASAGSGKTTVLVRRVIEKLKM-GFDIDELLIVTFTEAAAREMKERIQEALQEAVNSESDPVRRQHFTKQLVLLPTANISTLHAFCLTVIRRYYYLIDIDPVFRMLTDETETILMKEDVWDELREALYAENDERFFQLTMNFSNDRSDDGLTNLVFSLYEFARANPDPKKWLEQLSDNYRLPEGLAKSRLYQEQIRPLVLADIYQCVQLYEQMTQLAQGEGLEKMHEQVAGEQQQIKNIYEAFSQDRLEEAYAGLEQLTFSTFKSSRKAELKEISNEVKGMRDKAKKLIQQISKSYFPVSPSQMEELTDKALPLVEEMTKVTQSFMDGFSMRKREKGVLDFNDLEHLALQILTEKTKDAWLPSEASKHYRKKFKEVMVDEYQDVNQLQEAILYWLREPDDTKGNMFMVGDVKQSIYSFRLADPSLFIGKYENFSKKEGGRRIVLAENFRSRKEVLSFTNLIFEQLMDPAVGQINYDEAAKLIQGFSDFPENEQFEPEIMIYEKEQEESEIEIPTDDILEDKTEGELFMTGLKIRQLIDSSFMIYDKKSKKSRPIEYKDIVLLTPTKKNNLTILEIFKTLDIPLEMKDAQNYFQATEIRTMISLLQLIDNPYQDIPLAAVLRSPIVGLIEPELASIRLADRAH--TYYDAVLA--YQASNEDELAAKLEHFGKQLEHWRELARRSSITDLLWDIYYETGYLEYVVGL----PAGAQRQANLYALVDRAKAYEQS----SFRGLYQFVRFIEKMQEKDKDLAEPVISIEDNAVRVMTIHASKGLEFPVVFLLDMTKEFNLQDLRNRYAFEEKLGAGIRYMDPETRVLYDTLPFQAIKLVKQNKLLSEEMRKLYVGLTRAEQKLFIVGSYKNKEQMIQTWSEAADHEELVFDPALRLKGRSSLMNWIGYGLIRHPEMQKYLEEEISTSLLQHSNAQFSISWMNQQSIIEQRQLLAEKELVNLDQQMKEDETLLADSLQKRLAYEYPYQASSQTTSYQSVSEIKRLFEDPDDTQESRLTLESSQNKAASRQFRYTQEQLAEPKFLQKDRQVSAAAVGTATHALLQLLPLEMPTTESIHQKLQELVRKRLVDEKVAKKVDVSSIIWFFQTELGQQLIANKENVKREQPFSMLLPADEVFQDYPNQEDELLIHGIVDGYLEEKDHLNIYDFKTDFILHPDDPAEIDAIVQKYQGQLRLYQQAMSEALNKPVENVFLILLRVKQIININK
1UAA Chain:A ((2-616))-----------RLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQTLGRKE------------------ARGLMISTFHTLGLDIIKREYAALGMKANFSLF-DDTDQLALLKELTEGLIEDD---------------------KVLLQQ--------------------------------------------LISTISNW-------------------KND----------------LKTPSQ--------------------------------------AAA---------------------SAIGERDRIFAHCYGLYDAHLKACNVLDFDDLILLPTLLLQANE-------EVRKRWQNKIRYLLVDEYQDTNTSQYELVKLLVGS---RARFTVVGDDDQSIYSWRGARPQNLVLLSQDF---PALKVIKLEQNYRSSGRILKAANILIANNPHVFEK--------RLFSEL-----GYGAELKVLSA------------------NNEEHEAERVTGELIAHHFV------------NKTQYKDYAILYRGNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATLKKLGEWAMTRNKSMFTASFDMGLSQTLSGRGYEALTRFTHWLAEIQRL-AEREPIAAVRDLIHGMDYESWLYETSPSPKAAEMRMKNVNQLFSWMTEMLEGSELDEPMTLTQVVTRFTLRDMMER-------EEELDQVQLMTLHASKGLEFPYVYMVGMEEGFLPHQSSID-----------------------------------EDNIDEERRLAYVGITRAQKELTFTLCKERR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1UAA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2971 45183 15.21 75.43
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 15.21
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.358

(partial model without unconserved sides chains):
PDB file : Tito_1UAA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UAA-query.scw
PDB file : Tito_Scwrl_1UAA.pdb: