Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------------------------------------------------------------------------------------------EWCTVTVFYQG----RTSGYPLPTAKKV--GIVQSFPGEGKGYADYQ---YILDENCDWKEHGRPWLTGMRLETVPFVAKQKYE
1I2D Chain:A ((391-573))PRATQGFTIFLTGYMNSGKDAIARALQVTLNQQGGRSVSLLLGDTVRHELSSELGFTREDRHTNIQRIAFVATELTRAGAAVIAAPIAPYEESRKFARDAVSQAGSFFLVHVATPLEHCEQSDKRGIYAAARRGEIKGFTGVDDPYETPEKADLVVDFSKQSVRSIVHEIILV-LESQGFLERQ---


General information:
TITO was launched using:
RESULT:

Template: 1I2D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 148 -1232 -8.32 -17.35
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -8.32
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.228

(partial model without unconserved sides chains):
PDB file : Tito_1I2D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1I2D-query.scw
PDB file : Tito_Scwrl_1I2D.pdb: