Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MAAMASLGALALLLLSSLSRCSAEACLEPQITPSYYTTSDAVISTETVFIVEISLTCKNRVQNMALYADVGGK--QFPVTRGQDVGRYQVSWSLDHKSAHAGTYEVRF-----------------FDEESYSLLRKAQRNNEDIS-----------------IIPPLFTVSVDHRGTWNGP-----------------------WVSTEVLAAAIGLVIYYLAFSAKSHIQA----------
4OPB Chain:A ((4-233))GYMYIPSSRTRLGHE--AGIDSCPECAILEPVSSWPDLDAAP----------VGRSGPCGYNARDSIDYNQPTTNWGSDAVQSYSPGEEIEVQWCVDHNGDHGGMFTYRICQDQSIVDKFLDPSYLPTNDEKQAAEDCFDAGLLPCTDVSGQECGYSADCTEGEACWRNDWFTCNGFEASDRPKCQGVDNAELNSCYTSIAGGYTVTKKVKLPEYTSNHTLISFKWNSFQTGQIYLSCADIAIQ


General information:
TITO was launched using:
RESULT:

Template: 4OPB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 651 -4959 -7.62 -30.80
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -7.62
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.109

(partial model without unconserved sides chains):
PDB file : Tito_4OPB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OPB-query.scw
PDB file : Tito_Scwrl_4OPB.pdb: