Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNPRSLEEEKYDMSGARLALILCV---------TKAREGSEEDLDALEHMFRQLRFESTMKRDPTAEQFQEELEKFQQAIDSREDPVSCAFVVLMAHGREGFLKGEDGEMVKLENLFEALNNKNCQALRAKPKVYIIQACRGEQRDPGETVGGDEIVMVIKDSPQTIPTYTDALHVYSTVEGYIAYRHDQKGSCFIQTLVDVFTKR--KGHILELLTEVTRRMAEAELVQE-----GKARKTNPEIQSTLRKRLYLQ
1M72 Chain:A ((17-266))---PVDRNAPYYNMNHKHRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFKVTVFPNLKSEEINKFIQQTA--EM-DHSDADCLLVAVLTHGELGMLYAKDTH-YKPDNLWYYFTADKCPTLAGKPKLFFIQACQGDRLDGGITLSR----------SYRIPVHADFLIAFSTVPGYFSWRNTTRGSWFMQALCEELRYAGTERDILTLLTFVCQKVALDFESNAPDSAMMHQQKQVPCITSMLTRLLVFG


General information:
TITO was launched using:
RESULT:

Template: 1M72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1085 31446 28.98 139.76
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : 28.98
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.495

(partial model without unconserved sides chains):
PDB file : Tito_1M72.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M72-query.scw
PDB file : Tito_Scwrl_1M72.pdb: