Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLHYTKEDLLELGAEITTREIYQQPDVWREAFEFYQAKRE------EIAAFLQEIADKHDYIKVILTGAGTSAYVGDTLLPYFKEVYDERKWNFNAIATTDIVANPATYLKKDVATVLVSFARSGNSPESVATVDLAKSLVDELYQVTITCATDGKLALQAHGDDRNLLLLQPAVSNDAGFAMTSSFTSMMLTALLVFDPTEFA---------VKSERFEVVSSLARKVLDKAEDVKELVD---LDFNRVIYLGAGPFFGLAHEAQLKILELTAGQVATMYESPVGFRHGPKSLINDNTVVLVFGTTTDYTRKYDLDLVREVAGDQIARRVVLLSDQAFGLE--NVKEVALGCGGVLNDIYRVFPYIVYAQLFALLTSLKVENKPDTPSPTGTVNRVVQGVIIHEYQK
2PUT Chain:B ((4-355))-----------PYKHFMQKEIFEQPDSAFNTMRGRIDFENCVVTLGGLKSWLST-IR--RCRRIIMIACGTSYHSCLATRSIFEELTE---IPVSVELASDFLDRRSP-V--FRDDTCVFVSQSGETADSILALQYCLER--GALTVGIVNSVGSSMSRQTH-----CGVHINAG-PEIGVASTKAYTSQYIALVMFALSLSNDSISRKGRHEEIIKGLQKIPEQIKQVLKLENKIKDLCNSSLNDQKSLLLLGRGYQFATALEGALKIKEISY--MHSEGVLAGELKHGILALVDEDLPIIAFATRDS-LFPKVMSAIEQVTARD--GRPIVICNEGDAIISNDKVHTTLEVPE-TVDCLQGLLNVIPLQLISYWLAVNRGIDVD----------------------


General information:
TITO was launched using:
RESULT:

Template: 2PUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1884 3648 1.94 10.99
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : 1.94
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.470

(partial model without unconserved sides chains):
PDB file : Tito_2PUT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PUT-query.scw
PDB file : Tito_Scwrl_2PUT.pdb: