Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKVFLQNRDFRQLTINQWISTLGDTIFYLAFLNYVADASFAPLAILLITISETLP---QVLQIFL-----GVLADFQHHRVLKYTVISFAKFLLYSIVSL----SLSGQSFSLLLVAF-ICLINLLSDTLSYFSGAMLTPIFI--RIIGQDHLAEAIGFKQSTVSLVKTISNILGGVL---LGILSIQFISLLNALTFLI--AFLGILFIKTDLLKVEKTINYQEGLSVKSFCQHLL----QSSKLIWNMNKVLLVLFIISTSQAVINVTVPVSTLFLRNQPFLNL---QTGQSLA-LLSTFELSALIVGSLVSGYLQHTISIKTALYASLVIQLLLLVGFATVRFDWILIFSTLDAFFAGVLSPRLQELVFKQIPEESMGAVQSSISAITVVLPSLFTISLVTIATSFGTLAVSFVLLLFLLVAFVMLLNIRESI
5TF6 Chain:A ((1-367))MLT---RNRELTTVLVKNLPKSYNQNKVYKYFKHC--------GPIIHVDVADSLKKNFRFARIEFARYDGALAAITKTHKVVGQNEIIVSHLTECTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNPLEKSKRTDSATLEGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQMNRSLL-------GNREISVSLADKKPFLERNEVKRLLASRNSKELETLICLFPLSDKVSPSLICQFLQEEIHIN----EKDIRKILLVSDF----NGAIIIFR--DSKFAAKMLMILNGSQFQG-----------------KVIRS-------------GT-----------INDMKRYYNNQQN-


General information:
TITO was launched using:
RESULT:

Template: 5TF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1486 -106577 -71.72 -314.38
target 2D structure prediction score : 0.29
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -71.72
2D Compatibility (Sec. Struct. Predict.) : 0.29
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.233

(partial model without unconserved sides chains):
PDB file : Tito_5TF6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TF6-query.scw
PDB file : Tito_Scwrl_5TF6.pdb: