Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKSEHRHQLIRALITKNKIHTQAELQALLAKNDIQVTQATLSRDIKNMNLSKVREEDSA---YYVLNNGSISKWEKRLELYMEDALVWMRPVQHQVLLKTLPGLAQSFGSIIDTLSFPDAIATLCGNDVCLIICEDADTAQKC---FEELKKFAPPFFFEE
3LAJ Chain:B ((20-170))-----GRQARIVAILSSAQVRSQNELAALLAAEGIEVTQATLSRDLEELGAVKLRGADGGTGIYVVPE---VSGGTDRMARLLGELLVSTDDSGNLAVLRTPPGAAHYLASAIDRAALPQVVGTIAGDDTILVVAREPTTGAQLAGMFENLR----------


General information:
TITO was launched using:
RESULT:

Template: 3LAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 553 -29390 -53.15 -212.97
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -53.15
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.530

(partial model without unconserved sides chains):
PDB file : Tito_3LAJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LAJ-query.scw
PDB file : Tito_Scwrl_3LAJ.pdb: