Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNDEANKQLTDARFKRLV------GVQRTTFEEMLAVLKTAYQLK-------HAKGGRKPKLS-LEDLLMATLQYV-------------------------------------------------------------------------------------------------------------------------------------------------
5DLK Chain:A ((19-476))EPFSLSPIKDPQALHKELCSKNVIPVTSTLEDLLPATQAQHVFIKRGTFHSYNWTIKGRSLNMDRLRETCQSLVDRHSILRTSFVEHEGHPIQLVLANLDVKVREVQCWPGEDPMEVCKALWDGKDWPTLNVLGGSLPVRFTLVSCPGNEHVVLTIQISHSQWDGVSIPKLFSDFAAIYNQTPLPPTSDFAHYLYHRVSSAREDVQQDPTFQFWRHYLDGAKMAVPFAPGQTLWTFKGIVPPTLPSGITMATLVKAATALFLSYHLGSRDVVFGHTVNGRNLPMDNIESLLGCTLNFVPLRVTFPEDSTDWTVMDLLHHTQTQYTRALSHEHVELRDIFQHSTNWPAETPLSLIVQHQNIDLSFSLPLRGSSLDVQYSKFARFDPLDEVWIFTEPHADRLEVQVCANSRVLGQEQATELANNISAIITKFSTDPTARLLDITF


General information:
TITO was launched using:
RESULT:

Template: 5DLK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 79 1375 17.41 22.18
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : 17.41
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.259

(partial model without unconserved sides chains):
PDB file : Tito_5DLK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DLK-query.scw
PDB file : Tito_Scwrl_5DLK.pdb: