Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEHSSWHALIKAQLPEGYFGKINQFMEQVYSQGI-IYPPKEKVFQALLTTLLEEVKVVILGQDPYHGPGQAQGLSFSVPDSIPAPPSLQNILKELSDDIG--VKKSHD-LTAWAEQGVLLLNACLTVPAGQANGHAGQIWEPFTDAVIQVVNHLDRPVVFVLWGAYARKKKALVTNPHHLIIESAHPSPLSVYRGFWGSKPFSKANTFLKETGQEPIDWLR
3EUG Chain:A ((6-221))----TWHDVLAEEKQQPHFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQHGETPIDWM-


General information:
TITO was launched using:
RESULT:

Template: 3EUG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1057 -28826 -27.27 -135.97
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -27.27
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.572

(partial model without unconserved sides chains):
PDB file : Tito_3EUG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EUG-query.scw
PDB file : Tito_Scwrl_3EUG.pdb: