Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSA-KGPTKKHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDAKYAEYLAELDKEKPVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLL-ATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL
5DFF Chain:B ((20-276))LKICSWNVDGL---------RAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAE-----LQEL-PGLSHQYWSAPS-----YSGVGLL-SRQCPLKVSY-GIGD-E-----GRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYM-MNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL


General information:
TITO was launched using:
RESULT:

Template: 5DFF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1402 -27000 -19.26 -109.75
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -19.26
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_5DFF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DFF-query.scw
PDB file : Tito_Scwrl_5DFF.pdb: