Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------MELHFNLELVETYKSNS-QKARILTED--WVYRQSYCPNCGNNPLNHFENNRPVADFYCNHCSEEFEL-KSKKGNFSSTINDGAYATM--MKRVQADN---NPNFF---------FLTYTKNFEVNNFLVLPKQF-VTPKSIIQRKPLAPTARRAGWIGCNIDLSQVPSKGRIFLVQDGQVRD---PEKVTKE-------------------------------FKQGLFLRKSSLS---------------------SRGWTIEILNCIDKIEGSEF-------TLEDMYRFESDL--KNIFVKNN---HIKEKIRQQLQILRDKEIIEFKGRGKYRKL----
4OCV Chain:A ((24-378))TNEALFDVASHFALEGTVDSIEPYGDGHINTTYLVTTDGPRYILQRMNTGIFPDTVNLMRNVELVTSTLKAQGKETLDIVRTTSGDTWAEIDGGAWRVYKFIEHTMSYNLVPNPDVFREAGRAFGDFQNFLSGFDANQLTETIAHFHDTPHRFEDFKKALAADELGRAAGCGPEIEFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGFVGELRDSITAREAELLPFSGNLLTMECGMRFLADYLEGDVYFATKYPEHNLVRSRTQIKLVREMEQRADETRAIVADVMETT


General information:
TITO was launched using:
RESULT:

Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1046 35591 34.03 140.12
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 34.03
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.136

(partial model without unconserved sides chains):
PDB file : Tito_4OCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OCV-query.scw
PDB file : Tito_Scwrl_4OCV.pdb: