Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKSFLKTYRTYFISLIIPVVIMSGVYLSQGIYWNSDNSPLLGDGFHQYVIFDVAL-------RNILHGNSSLFYTFTSGLGLNFYALSSYYLGSFLAPLVYFFDLTNMPDAVYLTTLLKFGLIGLSTFFSLNKLFQSIPQTLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLHLLITEKKLLLYFTSLSILFIQNYYFGYMTVLFLIFWYLCQISWDFKTRKSSVLDFIVISFLAGMASLIMTLPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLFPFILTILFFTLKSIKFHVKLIYVIFFAFLIASFYIEALDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLKRLKELKVWNFLVSLFLVVAGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAILISLFILVEMSLNASSQMDGIAKEWGFASRSAYSRDILAMESFSTYIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSSSSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQYNISDSPIDKYGFKDIYQKDNLTLYENQYSLPIAVASQSVYNDVKFNEHTLDNQASFLNQLANVNFDYFSPIPYEKTEKIENTNDLISVTSSSNEDAAIQYQIEVPENSQVYLSFINLHFSNDKQKKVDILVNGEKKTFTTDNVFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDTKTFTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDIPKGKGTITLSFIPNGFITGAICSFTSLLLFGIYNHRRKSSKA
3RKO Chain:B ((1-612))MNMLALTIILPLIGFVL-LAFSRGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANGEQTYSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMR-----------GEEGYSRFFAYTNLF--IASMVVLVLADN---------------------------------------------LLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTL----NFREMVELAPAHFADGNNMLMWATLMLLGGA-VGKSAQLPLQ------------------------------------TWLADAMA----GPTPVSALIHAATMVTAGVYLIARTHGLFLM-TPEVLHLVGIVGAVTLLLAGFAALVQ-----TDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHE----------QNIFKMGGLRKSI------------------------------------------------PLVYLCFLVGGAALSALPLVTAGFFSKDEILAGAMANG---------HINLMVAGLVGAFMTSLYTFRMIFIVFHGK---------------EQIHAHAVKGVTHSLPLIVLLILSTFVGALIVPPLQGVLPQTT--------ELAHGSMLTLEITSGVVAVVGILLAAWLWLGKRTLVTSIANSAPGRLLSTWWYNAWGFDWLYDKVFVKPFLGIAWLL---------------------------KRDPLNSMMNIPAVLSRFAGKGLLLSE------------------NGYLRWYVASMSIGAVVVLALLMVL


General information:
TITO was launched using:
RESULT:

Template: 3RKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 3316 -331247 -99.89 -547.51
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain B : 0.59

3D Compatibility (PKB) : -99.89
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.202

(partial model without unconserved sides chains):
PDB file : Tito_3RKO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RKO-query.scw
PDB file : Tito_Scwrl_3RKO.pdb: